DEC OMERO Server: Difference between revisions

Revision as of 12:15, 11 March 2016

About the Collection Server

Draft page - notice removed when completed. No unregistered user can edit this site or the linked image database. MediaWiki Help page

The server] is currently available as a test site with only a few sample images loaded. DEC OMERO Server link. For server issues, access problems or account requests, please contact Mark Hill.

There is no unregistered user access available to the server. All users must apply for and account an agree to abide by access and reuse conditions before being issued a user account. Individual user accounts currently only have access specific folders. Access to other collection folders can be managed through user rights management.

Collections have been organised into folders named after their location city, as shown below.

Berlin
Bochum
Göttingen
Kyoto
Madrid
Sydney
Washington

Apply for DEC Account

For user account requests, please contact Mark Hill.

About OMERO

Draft page - notice removed when completed. No unregistered user can edit this site or the linked image database. MediaWiki Help page

OMERO is client-server software for visualization, management and analysis of biological microscope images.

Version

OMERO.web 5.0.8-ice35.

References

Melissa Linkert, Curtis T. Rueden, Chris Allan, Jean-Marie Burel, Will Moore, Andrew Patterson, Brian Loranger, Josh Moore, Carlos Neves, Donald MacDonald, Aleksandra Tarkowska, Caitlin Sticco, Emma Hill, Mike Rossner, Kevin W. Eliceiri, and Jason R. Swedlow (2010) Metadata matters: access to image data in the real world. The Journal of Cell Biology, Vol. 189no. 5777-782 doi: 10.1083/jcb.201004104 PMID 20513764

Chris Allan, Jean-Marie Burel, Josh Moore, Colin Blackburn, Melissa Linkert, Scott Loynton, Donald MacDonald, William J Moore, Carlos Neves, Andrew Patterson, Michael Porter, Aleksandra Tarkowska, Brian Loranger, Jerome Avondo, Ingvar Lagerstedt, Luca Lianas, Simone Leo, Katherine Hands, Ron T Hay, Ardan Patwardhan, Christoph Best, Gerard J Kleywegt, Gianluigi Zanetti & Jason R Swedlow (2012) OMERO: flexible, model-driven data management for experimental biology. Nature Methods 9, 245–253. Published: 28 February 2012 PMID 22373911

Links

The Open Microscopy Environment
OME Help
[http://help.openmicroscopy.org/web-client.html Using OMERO.web

@@ Line 22: / Line 22: @@
 For user account requests, please contact [mailto:m.hill@unsw.edu.au|Dr Mark Hill].
-==OMERO==
+==About OMERO==
+{{Draft page}}
+OMERO is client-server software for visualization, management and analysis of biological microscope images.
+===Version===
 OMERO.web 5.0.8-ice35.
+==References==
+Melissa Linkert, Curtis T. Rueden, Chris Allan, Jean-Marie Burel, Will Moore, Andrew Patterson, Brian Loranger, Josh Moore, Carlos Neves, Donald MacDonald, Aleksandra Tarkowska, Caitlin Sticco, Emma Hill, Mike Rossner, Kevin W. Eliceiri, and Jason R. Swedlow (2010) Metadata matters: access to image data in the real world. The Journal of Cell Biology, Vol. 189no. 5777-782 doi: 10.1083/jcb.201004104 PMID 20513764
+Chris Allan, Jean-Marie Burel, Josh Moore, Colin Blackburn, Melissa Linkert, Scott Loynton, Donald MacDonald, William J Moore, Carlos Neves, Andrew Patterson, Michael Porter, Aleksandra Tarkowska, Brian Loranger, Jerome Avondo, Ingvar Lagerstedt, Luca Lianas, Simone Leo, Katherine Hands, Ron T Hay, Ardan Patwardhan, Christoph Best, Gerard J Kleywegt, Gianluigi Zanetti & Jason R Swedlow (2012) OMERO: flexible, model-driven data management for experimental biology. Nature Methods 9, 245–253. Published: 28 February 2012 PMID 22373911
+==Links==
+* [https://www.openmicroscopy.org/site The Open Microscopy Environment]
+* [http://help.openmicroscopy.org OME Help]
+* [http://help.openmicroscopy.org/web-client.html Using OMERO.web