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====5. Uploading to Database====
==5. Uploading to Database==
This example shows E079 folder (left arrow) and its Dataset Details (right arrows).
 
 
'''Upload''' scans from embryo folder to the DEC Database.
'''Upload''' scans from embryo folder to the DEC Database.
# Use OMERO.insight - ([https://www.openmicroscopy.org/omero/downloads/ download page]) also see help page [http://help.openmicroscopy.org/importing-data-5.html Importing Data with OMERO.insight]
# Use OMERO.insight - ([https://www.openmicroscopy.org/omero/downloads/ download page]) also see help page [http://help.openmicroscopy.org/importing-data-5.html Importing Data with OMERO.insight]

Latest revision as of 18:29, 29 September 2019

5. Uploading to Database

This example shows E079 folder (left arrow) and its Dataset Details (right arrows).


Upload scans from embryo folder to the DEC Database.

  1. Use OMERO.insight - (download page) also see help page Importing Data with OMERO.insight
  2. All collection uploads require database ADMIN access to upload as the User - Rosa Mirapiex.
  3. Make a new (green) folder in user Rosa Mirapiex for each embryo/fetus (there are examples in the database).
  4. For correct sorting of folders, numbering should have 3 digits, for example E76 becomes E076.
  5. Dataset Details - Add Embryo/Fetus information from collection spreadsheet to the folder Dataset Details.


Screen-Shot-2019-09-29-at-10.11.06-am.jpg

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